Virtual Screening for Small Molecule Inhibitors of Tumor Necrosis Factor- Based on Database of Traditional Chinese Medicine
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Virtual Screening for Small Molecule Inhibitors of Tumor Necrosis Factor- Based on Database of Traditional Chinese Medicine
Chinese Journal of Experimental Traditional Medical FormulaeVol. 16, Issue 13, Pages: 199-202(2010)
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Published:2010
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ZHU Wei, YAO Li-mei. Virtual Screening for Small Molecule Inhibitors of Tumor Necrosis Factor- Based on Database of Traditional Chinese Medicine[J]. Chinese journal of experimental traditional medical formulae, 2010, 16(13): 199-202.
DOI:
ZHU Wei, YAO Li-mei. Virtual Screening for Small Molecule Inhibitors of Tumor Necrosis Factor- Based on Database of Traditional Chinese Medicine[J]. Chinese journal of experimental traditional medical formulae, 2010, 16(13): 199-202.DOI:
Virtual Screening for Small Molecule Inhibitors of Tumor Necrosis Factor- Based on Database of Traditional Chinese Medicine
Objective: To report the preliminary result of virtual screening small molecule inhibitors of tumor necrosis factor-α(TNF-α)based on the traditional Chinese medicine database. Method: Based on the optimized complex structure of TNF-α bound with specific inhibitor (compound 307
PDB code 2AZ5)
computer-aided structure-based virtual screening against Chinese Natural Product Database(CNPD) was conducted to determine the occurrence of herb-based TNF-α inhibitors in the software package Discovery Studio (2.5) of Accerlrys company. The virtual screening results were further filtered by predictive ADME simulation and predictive toxic simulation. Result: According to the dockscore of original inhibitor (compound 307) and the receptor as threshold value
12 drug-like molecules were predicted to have good interactions with TNF-α. Conclusion: It is expected that the TNF-α small molecule inhibitors identified at present study could be helpful for development of new drug to treat rheumatoid arthritis and inflammatory bowel disease.