YANG Ni, SU Wei-min, JIN Ya-hui, et al. Investigation of Extracton Methods of DNA from for Simple Sequence Repeat Analysis[J]. Chinese journal of experimental traditional medical formulae, 2015, 21(4): 80-83.
DOI:
YANG Ni, SU Wei-min, JIN Ya-hui, et al. Investigation of Extracton Methods of DNA from for Simple Sequence Repeat Analysis[J]. Chinese journal of experimental traditional medical formulae, 2015, 21(4): 80-83. DOI: 10.13422/j.cnki.syfjx.2015040080.
Investigation of Extracton Methods of DNA from for Simple Sequence Repeat Analysis
Objective: To obtain high quality DNA from Curcuma kwangsiensis for simple sequence repeat(SSR) analysis
and provide a reference for research of genetic diversity of this variety. Method: Taking C. kwangsiensis leaves as experimental material
total DNA was extracted by the classic cetyl trimethyl ammonium bromide(CTAB) method and the modified CTAB method
difference between machine grinding and hand grinding was investigated
concentration and purity were determined by UV.DNA as a template for polymerase chain reaction(PCR) amplification
taking clest SSR-01
clest SSR-03
clest SSR-06
clest SSR-08
clest SSR-14 and clest SSR-15 as primers
polyacrylamide gel electrophoresis was adopted to detect DNA amplification effect. Result: When DNA extracted by the modified CTAB method
A260 nm/A280 nm of them was 1.8-2.0
proteins
polysaccharides
RNA and other substances were removed completely
DNA conformed to requirements of PCR amplification result
it could amplify out clear bands by C. universal primers and was suitable for SSR analysis.A260 nm/A280 nm of DNA extracted by the classic CTAB method was 1.5-1.6
it contained some impurities
which cloud not be used for PCR amplification and other molecular biology researches. Conclusion: DNA quality is good which was extracted by the modified CTAB method
this method can effectively remove interferenceof the secondary metabolites for DNA
it is suitable for SSR molecular marker and genetic diversity analysis analysis of C. kwangsiensis.