ZHANG Da-yan, WEN Huan, WANG Wei, et al. Transcriptional Analysis of Terpenoid Biosynthesis in [J]. Chinese journal of experimental traditional medical formulae, 2017, 23(16): 45-50.
DOI:
ZHANG Da-yan, WEN Huan, WANG Wei, et al. Transcriptional Analysis of Terpenoid Biosynthesis in [J]. Chinese journal of experimental traditional medical formulae, 2017, 23(16): 45-50. DOI: 10.13422/j.cnki.syfjx.2017160045.
Transcriptional Analysis of Terpenoid Biosynthesis in
Objective: To study on the expression of genes involved in the biosynthesis of terpenoid secondary metabolism
and explore the functional genes in Aconitum carmichaelii based on transcriptomics sequencing analysis of six A. carmichaelii organs (including main root
lateral root
stem
leaves
flower and fruit). Method: Illumina Hiseq 2500 was used to detect the sequencing and assemble into unigennes. By comparing with public database
the genes were annotated and differential expressed genes were obtained. Subsequently
Real-time PCR method was used to verify the key genes involved in the terpenoid secondary metabolism biosynthesis. Result: Total 156 967 635 Clean Reads (28 254 174 300 bp) were obtained
and 103 337 unigenes were obtained after sequence merging. Homology analysis of nucleotide and protein sequences indicated that 37.31% (38 554 unigenes) had different degree of homology with other creatures. In analysis of the functional classification and metabolic pathway (KEGG)
158 unigenes (encoding 5 enzymes) were involved in terpenoid synthesis. Conclusion: These genes will provide the basic data for the terpenoids biosynthetic pathway and molecular mechanism of A. carmichaelii.
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Related Author
CHEN Chang
LIU An
ZHOU Jing
WANG Guohua
XU Qingxia
CHENG Jintang
LIU Yan
CHEN Sha
Related Institution
School of Chinese Materia Medica,Chongqing University of Chinese Medicine
School of Basic Science,Shanxi Key Laboratory for Modernization of Traditional Chinese Veterinary Medicine,Shanxi Agricultural University
Institute of Chinese Materia Medica,China Academy of Chinese Medical Sciences
Hunan Traditional Chinese Medicine Piece Standardization and Function Technology Research Center
Key Laboratory of Traditional Chinese Medicine Modernization Research in General Colleges and Universities of Hunan Province