YANG Ting,CHEN Li-na,QU Shui-qing,et al.Mechanism of Shengmaiyin (Dangshen Prescription) in Treatment of Atherosclerotic Cardiovascular Disease Based on Network Pharmacology[J].Chinese Journal of Experimental Traditional Medical Formulae,2020,26(17):151-161.
YANG Ting,CHEN Li-na,QU Shui-qing,et al.Mechanism of Shengmaiyin (Dangshen Prescription) in Treatment of Atherosclerotic Cardiovascular Disease Based on Network Pharmacology[J].Chinese Journal of Experimental Traditional Medical Formulae,2020,26(17):151-161. DOI: 10.13422/j.cnki.syfjx.20201706.
Mechanism of Shengmaiyin (Dangshen Prescription) in Treatment of Atherosclerotic Cardiovascular Disease Based on Network Pharmacology
借助中西医结合数据库(SymMap),中药系统药理学技术平台(TCMSP)以及BATMAN-TCM平台获取生脉饮(党参方)主要化学成分,SymMap和中医药百科网站(ETCM)检索化合物靶点,借助疾病相关的基因与突变位点数据库(DisGeNET)和基因组注释(GeneCards)数据库检索疾病靶点;化合物靶点与疾病靶点作交集得到生脉饮(党参方)作用于ASCVD的预测靶点。利用蛋白质相互作用(STRING)数据库构建靶蛋白相互作用(PPI)网络图,借助Cytoscape软件获取生脉饮(党参方)作用于ASCVD的关键化合物和关键靶点,最后用The Database for Annotation,Visualization and Integrated Discovery(DAVID)网站将富集到的关键靶点进行基因本体(GO)生物学过程分析和京都基因与基因组百科全书(KEGG)通路分析。
targets and molecular pathways of Shengmaiyin (Dangshen prescription) in the treatment of atherosclerotic cardiovascular disease (ASCVD) were studied
in order to reveal the molecular mechanism of Shengmaiyin (Dangshen prescription) in the treatment of ASCVD
and provide the rational explanation of the compatibility of the combination.
Method
2
The main chemical components of Shengmaiyin (Dangshen prescription) were obtained by means of SymMap database
traditional Chinese medicine systems pharmacology database and analysis platform(TCMSP)platform and BATMAN-TCM platform. Compound targets were retrieved by SymMap and the Encyclopedia of Traditional Chinese Medicine (ETCM)
and disease targets were retrieved by DisGeNET and GeneCards databases. The intersections of compound targets and disease targets were used to obtain the predicted targets of song-decoction on ASCVD. The Protein-Protein Interaction (PPI) network diagram was constructed through STRING database
and key compounds and targets of Shengmaiyin (Dangshen prescription) acting on ASCVD were obtained through Cytoscape. Finally
the enriched key targets were put for Gene Ontology (GO) biological process analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis through the Database for Annotation,Visualization and Integrated Discovery(DAVID).
Result
2
There were 33 key compounds and 25 key targets of Shengmaiyin (Dangshen prescription) for ASCVD. The GO analysis showed that the biological functions of Shengmaiyin (Dangshen prescription) in the treatment of key ASCVD targets mainly involved biological processes
such as the regulation of apoptosis
inflammatory response
regulation of nitric oxide synthesis and regulation of insulin secretion. The KEGG pathway was mainly enriched in 20 signaling pathways
including tumor necrosis factor(TNF) signaling pathway
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